GBrowse Details

Vigan.01G264900.01

Basic Information:
Name: Vigan.01G264900.01
Multiple alignment
Variant Information
Position: Chr01:37593163..37594443 (- strand)
Length: 1281
Functional Information:
Description: Similar to Sulfiredoxin. [V7CI24, Phaseolus vulgaris]
InterPro: ParB/Sulfiredoxin (IPR003115)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:3.85,1.58,4.15,12.57,1.43,10.00,3.25 ,4.52
Arabidopsis thaliana homolog: AT1G31170.4
Automatic updates:
Name: NM_001248967 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527425 (LOC100527425), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:37593163..37593449 (- strand)
Length: 287
Type: three_prime_UTR
Position: Chr01:37593450..37593653 (- strand)
Length: 204
Type: CDS
Position: Chr01:37593801..37593970 (- strand)
Length: 170
Type: CDS
Position: Chr01:37594059..37594131 (- strand)
Length: 73
Type: CDS
Position: Chr01:37594132..37594443 (- strand)
Length: 312
Type: five_prime_UTR

>Vigan.01G264900.01 class=Sequence position=Chr01:37593163..37594443 (- strand)
TGCCAATCCA TAGTGGCCAG TGTTCTACAA GTTCATGAGA AAGAACGATC GCTGCCATGG TTCCCGGCGA AGTTGAAAAT
TATTTGGAAT CAATTTTAAG GGAAAACCTC TCACCAATTT GTGGAGCGAA TTCCGTGTTG AAGGGTCTTT TATATAGCTT
CAAAAGAACA ATCTTGGTCG TTGAATTTAA GTGGGCCATG CTTGAGTGGT GATAGCAATC ATCAGGTTCT CCGTTCACAC
CATTTTGACT ATATATTTAG AACCGTGAGA GGAAAAAATG TAATAAACTT GGTAAGAAGA AGAAGAAGAA AAATGGCAAA
TTTTGTTCTG CGAGTTCCAA ATACCATAAG GAGTTTCGCC ATGTTTGCTT CGTCCAACCC CAACGGTGCA ATACTCTCTA
TTTCTTTCTG TCAATTGAAA TTGCGTTTTT ATTCTCTTTG TTTCATTTTC ATATGGTTTA TTTAATTGTT TAGGTGCTCC
ACCTGGTGGC TCTGGAAGCA GTAGTGGTGG GGGTGGAGGT CCTGTGATAT TGGAAATTCC TATAGATAAG ATTAGAAGGC
CTTTGATGAG GACCAGAGCA AATGATCCAA ACAAAGTAAA GGAATTAATG GATAGTATCA AGGAAATTGG TCTCCAAGTA
CCTGTAACCA CTTGCTCCTT TATGCTGATT CATGTTTAAA ATATTTTCCA TTACTTTTGG AGTTTATGTA CTGTTTCTGC
TATATTGGTA TGTCTCAGTT GGGTTTATGG GAAAGTGAAG TTACGGGTGT TGGCTTTTCT GTGTTTTCAG GATCTATTGG
ATGTAGTTGG AATTGGATTT ATGTGCTTAA ATTGCTTCTT TCTTTGGTCT TCAAGCTTTG GCTATTCAGA TCTGCGAGTA
CAGAAAAAAA AATGTGAAAG CAACCAACTT AAAACGATTT TTATGGATTT GTTGGAACAA TTTTTCACTG GAATTTGGAA
TAGCAGTATC TGCGTTCCCA CTCCAAACTG TTAATGAGCT ATTATCTTTG CATAGAAAGA TTTTTCCCTT TTTCCTTATT
GTTACTTTCA TTTAAGAGGT AAGAGTTTCA TGTTTCGCTG AAGGAGATTT TGAGATGTCT TTCTTTGTAG TATCTCCACC
ATTAACAGGG CGACCCTTAT GTTTGTTAGC CATAGATAGA GCCTTTAGTA GTTATCAAGG TCCCCTCTCT TTCAGAGTCA
GATTTTTTTA GGAGTTTACC AATGGATGCA AAGATTCATT GTTACAGCCA TTTTCTTTTA TATTGTGTAC TTGTGACTGA
G

>Vigan.01G264900.01
TGCCAATCCA TAGTGGCCAG TGTTCTACAA GTTCATGAGA AAGAACGATC GCTGCCATGG TTCCCGGCGA AGTTGAAAAT
TATTTGGAAT CAATTTTAAG GGAAAACCTC TCACCAATTT GTGGAGCGAA TTCCGTGTTG AAGGGTCTTT TATATAGCTT
CAAAAGAACA ATCTTGGTCG TTGAATTTAA GTGGGCCATG CTTGAGTGGT GATAGCAATC ATCAGGTTCT CCGTTCACAC
CATTTTGACT ATATATTTAG AACCGTGAGA GGAAAAAATG TAATAAACTT GGTAAGAAGA AGAAGAAGAA AAATGGCAAA
TTTTGTTCTG CGAGTTCCAA ATACCATAAG GAGTTTCGCC ATGTTTGCTT CGTCCAACCC CAACGGTGCT CCACCTGGTG
GCTCTGGAAG CAGTAGTGGT GGGGGTGGAG GTCCTGTGAT ATTGGAAATT CCTATAGATA AGATTAGAAG GCCTTTGATG
AGGACCAGAG CAAATGATCC AAACAAAGTA AAGGAATTAA TGGATAGTAT CAAGGAAATT GGTCTCCAAG TACCTGATCT
ATTGGATGTA GTTGGAATTG GATTTATGTG CTTAAATTGC TTCTTTCTTT GGTCTTCAAG CTTTGGCTAT TCAGATCTGC
GAGTACAGAA AAAAAAATGT GAAAGCAACC AACTTAAAAC GATTTTTATG GATTTGTTGG AACAATTTTT CACTGGAATT
TGGAATAGCA GTATCTGCGT TCCCACTCCA AACTGTTAAT GAGCTATTAT CTTTGCATAG AAAGATTTTT CCCTTTTTCC
TTATTGTTAC TTTCATTTAA GAGGTAAGAG TTTCATGTTT CGCTGAAGGA GATTTTGAGA TGTCTTTCTT TGTAGTATCT
CCACCATTAA CAGGGCGACC CTTATGTTTG TTAGCCATAG ATAGAGCCTT TAGTAGTTAT CAAGGTCCCC TCTCTTTCAG
AGTCAGATTT TTTTAGGAGT TTACCAATGG ATGCAAAGAT TCATTGTTAC AGCCATTTTC TTTTATATTG TGTACTTGTG
ACTGAG

>Vigan.01G264900.01
ATGGCAAATT TTGTTCTGCG AGTTCCAAAT ACCATAAGGA GTTTCGCCAT GTTTGCTTCG TCCAACCCCA ACGGTGCTCC
ACCTGGTGGC TCTGGAAGCA GTAGTGGTGG GGGTGGAGGT CCTGTGATAT TGGAAATTCC TATAGATAAG ATTAGAAGGC
CTTTGATGAG GACCAGAGCA AATGATCCAA ACAAAGTAAA GGAATTAATG GATAGTATCA AGGAAATTGG TCTCCAAGTA
CCTGATCTAT TGGATGTAGT TGGAATTGGA TTTATGTGCT TAAATTGCTT CTTTCTTTGG TCTTCAAGCT TTGGCTATTC
AGATCTGCGA GTACAGAAAA AAAAATGTGA AAGCAACCAA CTTAAAACGA TTTTTATGGA TTTGTTGGAA CAATTTTTCA
CTGGAATTTG GAATAGCAGT ATCTGCGTTC CCACTCCAAA CTGTTAA

>Vigan.01G264900.01
MANFVLRVPN TIRSFAMFAS SNPNGAPPGG SGSSSGGGGG PVILEIPIDK IRRPLMRTRA NDPNKVKELM DSIKEIGLQV
PDLLDVVGIG FMCLNCFFLW SSSFGYSDLR VQKKKCESNQ LKTIFMDLLE QFFTGIWNSS ICVPTPNC*