GBrowse Details

Vigan.01G213300.01

Basic Information:
Name: Vigan.01G213300.01
Multiple alignment
Variant Information
Position: Chr01:27860763..27863248 (+ strand)
Length: 2486
Functional Information:
Description: Similar to Isoflavone synthase 1. [B2MU03, Vigna unguiculata]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: iron ion binding (GO:0005506)
Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705)
Molecular Function: heme binding (GO:0020037)
InterPro: Cytochrome P450 (IPR001128)
Cytochrome P450, E-class, group I (IPR002401)
Cytochrome P450, conserved site (IPR017972)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:17.19,9.96,34.04,11.64,293.56,6.35,2 63.71,7.79
Automatic updates:
Name: KP843618 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max cultivar DS 2706 isoflavone synthase 1 mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: KT581120 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max cultivar DS 2706 isoflavone synthase 2 mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: LT594989 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max mRNA for isoflavone synthase enzyme (Isoflavone synthase 1 (IFS) gene), cultivar DT84.
PubMed ID: -
Status: Known Variant
Name: LT594990 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max mRNA for isoflavone synthase enzyme (Isoflavone synthase 1 (IFS) gene), cultivar DT26.
PubMed ID: -
Status: Known Variant
Name: LT594991 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max mRNA for isoflavone synthase enzyme (Isoflavone synthase 1 (IFS) gene), cultivar DT51.
PubMed ID: -
Status: Known Variant
Name: LT594992 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max mRNA for isoflavone synthase enzyme (Isoflavone synthase 1 (IFS) gene), cultivar DT2008.
PubMed ID: -
Status: Known Variant
Name: NM_001249093 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max isoflavone synthase 1 (IFS1), mRNA.
PubMed ID: 26856401 NCBI(pubmed)
24467893 NCBI(pubmed)
23572918 NCBI(pubmed)
15778457 NCBI(pubmed)
10657130 NCBI(pubmed)
Status: Known Variant
Name: NM_001249093 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max isoflavone synthase 1 (IFS1), mRNA.
PubMed ID: 26856401 NCBI(pubmed)
24467893 NCBI(pubmed)
23572918 NCBI(pubmed)
10657130 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:27860763..27861125 (+ strand)
Length: 363
Type: five_prime_UTR
Position: Chr01:27861126..27862022 (+ strand)
Length: 897
Type: CDS
Position: Chr01:27862306..27862974 (+ strand)
Length: 669
Type: CDS
Position: Chr01:27862975..27863248 (+ strand)
Length: 274
Type: three_prime_UTR

>Vigan.01G213300.01 class=Sequence position=Chr01:27860763..27863248 (+ strand)
GAAAGTCATA GCACGAGATC TTAGACCATA TGTGTGGTAG TTGGTATATA GGCGTTTTGA GTTTGGTTTA TGCCATCTTT
GTAGTAAAAC CAGTTCAATC TTCGTTTTGT TAAATAATAA AAGCAAGTAT TTCATTCGTG GTCTGCTTCG GGAGTAAAAC
AAAGTATTGG AATAGAATAA TCTACTGGGC CCACTAACAA GAAAAATATC ATACATTTAA TCCAAGAAAT GCTCCCATGA
GTTGTGAATC AGATTCTATA AAAGGGGAGC TGGGCAAGGT AGGATCCTCA GGCCAAAATC TTGGTTACTT ATCCTCAAGC
TCGGGATCAC AAAAACAAAG GTCAGACAAA CACATTCACG ACCATGTTGC TCGAAATTAC AATTGGTTTG CTGGTGCTGG
CTTTGTTTTT GCACTTGCGT CCCACACCCA CTGCTAAATC AAAGGCCCTT CGCCACCTTC CCAACCCTCC CAGTCCAAAG
CCTCGTCTTC CATTCATTGG TCACCTTCAC CTTCTAAAGG ACAAACTTCT CCACTATGCT CTCATAGATT TATCCAAAAA
GTATGGCCCT CTGTATTCTC TCTACTTTGG GTCTATGCCA ACCGTTGTTG CCTCCTCCCC TGAGTTATTC AAACTCTTCC
TTCAAACCCA CGAGGCTGCT TCCTTCAACA CAAGGTTCCA AACCTCTGCC ATAAGGCGCC TCACTTATGA CAACTCAGTG
GCCATGGTTC CCTTTGGACC TTACTGGAAG TTCATCAGGA AGCTCATCAT GAACGACCTT CTCAACGCCA CCACCGTCAA
CAAGTTGAGG CCCCTGAGGA CCCAACAGAT CCGTAAGTTC CTCAAGGTGA TGGCCCAAAG CGCACAGGCT CAACAGCCCC
TTAACGTCAC CGAGGAGCTT CTTAAGTGGA CCAACAGCAC TATCTCCATG ATGATGTTGG GTGAGGCTGA AGAGATTAGA
GATATTGCTC GTGAGGTGCT TAAGATTTTC GGGGAGTACA GTCTCACTGA CTTCATCTGG CCATTGAAGA AGCTCAAGTT
TGGACAGTAC GAGAAGAGGA TCGATGAAAT ATTCAACAAG TTCGACCCTG TCATTGAGAG GGTTATTAAG AAGCGCCGAG
AGATCATGAG AAGGAGAAAG AACGGAGAAG TCATTGAGGA AGAGCAGAGC GGAGTTTTCC TCGACACTTT GCTTGAATTC
GCTGAGGACG AGACCATGGA GATCAAAATT ACCAAGGAGC AGATCAAGGG TCTTGTTGTT GTGAGTTTCC TACTTCTTTT
TGATTGGTCG GCTTCATCAT CATATTTAAT AATATATATC ACTATAAAAA TAACCCTATA GGGATAAAAG TCTTTTTAAA
CTGTTGGAAT ATTTAATGAA GGAAATGTTA ATGCTATACT CAATAATTGT ATTTATAGTA TTGGTGTAGA TAAGGTGACC
ACATATAATG TGTATATCAA GACAAAAAGT ATATATGACG AGTTAATTGG ATTTTTATTT GATGTTGCAA CGTAGACTAA
TAGACAGTCG TTTGTATGTG CAGGACTTCT TCTCAGCAGG GACAGATTCC ACAGCTGTGG CAACTGAGTG GGCTTTGGCA
GAGCTGATCA ACAACCCTAG GGTGTTGCAG AAGGCTCGGG AGGAGGTATA CAGTGTTGTG GGAAAAGATA GACTGGTTGA
TGAAGTTGAT ACTCAAAACC TTCCTTACAT CAGGGCGATT GTGAAGGAGA CATTCCGCAT GCACCCACCA CTCCCTGTGG
TGAAAAGAAA GTGTGTGGAA GAGTGTGAGA TTGACGGGTA TGTGATCCCA GAGGGAGCAT TGATACTTTT CAATGTGTGG
GCTGTAGGAA GAGACCCTAA ATACTGGGAC AGACCATTGG AGTTTCGTCC TGAGAGATTC TTGGAAACTG GAGCTGAAGG
AGAAGCTGGG CCTCTTGATC TTAGGGGCCA ACATTTCACA CTTCTCCCAT TTGGGTCAGG TAGAAGAATG TGCCCTGGAG
TGAATTTGGC TACTTCAGGT ATGGCAACAC TTCTTGCATC TGTTATCCAG TGCTTTGACC TGCAAGTGGT GGGCCCACAA
GGACAAATAT TGAAAGGCAA TGACGCCAAA GTGAGCATGG AAGAGAGAGG TGGACTCACG GTTCCAAGGG CACATAATCT
GGAGTGTGTT CCAGTTGCAA GGACAAGCGT TGCAGCTAAA CTCCTTTCCT AGTTCACAAG ATATATACAA CAACAGTGTC
TTGCCACGCA TACAGTTGCT TTTGTGTGTT TATAATAATC GTTTCAATAA GGTGTCTTTG ATACTTAACG AAGTCAGGCA
CATTCAGATG TATCATATAT CAACTCCAGT TTATCAGTTT GTACCAATGT CATGTAGAAG TTTTGGATCT AAGTCAAATT
CTTTTGGAGA ATCTTATAAT GTACTATATA TTACCAGTCC CTTATAATAA TATTTTAACA GTTTGAATCG AAAAATTATT
TATCAA

>Vigan.01G213300.01
GAAAGTCATA GCACGAGATC TTAGACCATA TGTGTGGTAG TTGGTATATA GGCGTTTTGA GTTTGGTTTA TGCCATCTTT
GTAGTAAAAC CAGTTCAATC TTCGTTTTGT TAAATAATAA AAGCAAGTAT TTCATTCGTG GTCTGCTTCG GGAGTAAAAC
AAAGTATTGG AATAGAATAA TCTACTGGGC CCACTAACAA GAAAAATATC ATACATTTAA TCCAAGAAAT GCTCCCATGA
GTTGTGAATC AGATTCTATA AAAGGGGAGC TGGGCAAGGT AGGATCCTCA GGCCAAAATC TTGGTTACTT ATCCTCAAGC
TCGGGATCAC AAAAACAAAG GTCAGACAAA CACATTCACG ACCATGTTGC TCGAAATTAC AATTGGTTTG CTGGTGCTGG
CTTTGTTTTT GCACTTGCGT CCCACACCCA CTGCTAAATC AAAGGCCCTT CGCCACCTTC CCAACCCTCC CAGTCCAAAG
CCTCGTCTTC CATTCATTGG TCACCTTCAC CTTCTAAAGG ACAAACTTCT CCACTATGCT CTCATAGATT TATCCAAAAA
GTATGGCCCT CTGTATTCTC TCTACTTTGG GTCTATGCCA ACCGTTGTTG CCTCCTCCCC TGAGTTATTC AAACTCTTCC
TTCAAACCCA CGAGGCTGCT TCCTTCAACA CAAGGTTCCA AACCTCTGCC ATAAGGCGCC TCACTTATGA CAACTCAGTG
GCCATGGTTC CCTTTGGACC TTACTGGAAG TTCATCAGGA AGCTCATCAT GAACGACCTT CTCAACGCCA CCACCGTCAA
CAAGTTGAGG CCCCTGAGGA CCCAACAGAT CCGTAAGTTC CTCAAGGTGA TGGCCCAAAG CGCACAGGCT CAACAGCCCC
TTAACGTCAC CGAGGAGCTT CTTAAGTGGA CCAACAGCAC TATCTCCATG ATGATGTTGG GTGAGGCTGA AGAGATTAGA
GATATTGCTC GTGAGGTGCT TAAGATTTTC GGGGAGTACA GTCTCACTGA CTTCATCTGG CCATTGAAGA AGCTCAAGTT
TGGACAGTAC GAGAAGAGGA TCGATGAAAT ATTCAACAAG TTCGACCCTG TCATTGAGAG GGTTATTAAG AAGCGCCGAG
AGATCATGAG AAGGAGAAAG AACGGAGAAG TCATTGAGGA AGAGCAGAGC GGAGTTTTCC TCGACACTTT GCTTGAATTC
GCTGAGGACG AGACCATGGA GATCAAAATT ACCAAGGAGC AGATCAAGGG TCTTGTTGTT GACTTCTTCT CAGCAGGGAC
AGATTCCACA GCTGTGGCAA CTGAGTGGGC TTTGGCAGAG CTGATCAACA ACCCTAGGGT GTTGCAGAAG GCTCGGGAGG
AGGTATACAG TGTTGTGGGA AAAGATAGAC TGGTTGATGA AGTTGATACT CAAAACCTTC CTTACATCAG GGCGATTGTG
AAGGAGACAT TCCGCATGCA CCCACCACTC CCTGTGGTGA AAAGAAAGTG TGTGGAAGAG TGTGAGATTG ACGGGTATGT
GATCCCAGAG GGAGCATTGA TACTTTTCAA TGTGTGGGCT GTAGGAAGAG ACCCTAAATA CTGGGACAGA CCATTGGAGT
TTCGTCCTGA GAGATTCTTG GAAACTGGAG CTGAAGGAGA AGCTGGGCCT CTTGATCTTA GGGGCCAACA TTTCACACTT
CTCCCATTTG GGTCAGGTAG AAGAATGTGC CCTGGAGTGA ATTTGGCTAC TTCAGGTATG GCAACACTTC TTGCATCTGT
TATCCAGTGC TTTGACCTGC AAGTGGTGGG CCCACAAGGA CAAATATTGA AAGGCAATGA CGCCAAAGTG AGCATGGAAG
AGAGAGGTGG ACTCACGGTT CCAAGGGCAC ATAATCTGGA GTGTGTTCCA GTTGCAAGGA CAAGCGTTGC AGCTAAACTC
CTTTCCTAGT TCACAAGATA TATACAACAA CAGTGTCTTG CCACGCATAC AGTTGCTTTT GTGTGTTTAT AATAATCGTT
TCAATAAGGT GTCTTTGATA CTTAACGAAG TCAGGCACAT TCAGATGTAT CATATATCAA CTCCAGTTTA TCAGTTTGTA
CCAATGTCAT GTAGAAGTTT TGGATCTAAG TCAAATTCTT TTGGAGAATC TTATAATGTA CTATATATTA CCAGTCCCTT
ATAATAATAT TTTAACAGTT TGAATCGAAA AATTATTTAT CAA

>Vigan.01G213300.01
ATGTTGCTCG AAATTACAAT TGGTTTGCTG GTGCTGGCTT TGTTTTTGCA CTTGCGTCCC ACACCCACTG CTAAATCAAA
GGCCCTTCGC CACCTTCCCA ACCCTCCCAG TCCAAAGCCT CGTCTTCCAT TCATTGGTCA CCTTCACCTT CTAAAGGACA
AACTTCTCCA CTATGCTCTC ATAGATTTAT CCAAAAAGTA TGGCCCTCTG TATTCTCTCT ACTTTGGGTC TATGCCAACC
GTTGTTGCCT CCTCCCCTGA GTTATTCAAA CTCTTCCTTC AAACCCACGA GGCTGCTTCC TTCAACACAA GGTTCCAAAC
CTCTGCCATA AGGCGCCTCA CTTATGACAA CTCAGTGGCC ATGGTTCCCT TTGGACCTTA CTGGAAGTTC ATCAGGAAGC
TCATCATGAA CGACCTTCTC AACGCCACCA CCGTCAACAA GTTGAGGCCC CTGAGGACCC AACAGATCCG TAAGTTCCTC
AAGGTGATGG CCCAAAGCGC ACAGGCTCAA CAGCCCCTTA ACGTCACCGA GGAGCTTCTT AAGTGGACCA ACAGCACTAT
CTCCATGATG ATGTTGGGTG AGGCTGAAGA GATTAGAGAT ATTGCTCGTG AGGTGCTTAA GATTTTCGGG GAGTACAGTC
TCACTGACTT CATCTGGCCA TTGAAGAAGC TCAAGTTTGG ACAGTACGAG AAGAGGATCG ATGAAATATT CAACAAGTTC
GACCCTGTCA TTGAGAGGGT TATTAAGAAG CGCCGAGAGA TCATGAGAAG GAGAAAGAAC GGAGAAGTCA TTGAGGAAGA
GCAGAGCGGA GTTTTCCTCG ACACTTTGCT TGAATTCGCT GAGGACGAGA CCATGGAGAT CAAAATTACC AAGGAGCAGA
TCAAGGGTCT TGTTGTTGAC TTCTTCTCAG CAGGGACAGA TTCCACAGCT GTGGCAACTG AGTGGGCTTT GGCAGAGCTG
ATCAACAACC CTAGGGTGTT GCAGAAGGCT CGGGAGGAGG TATACAGTGT TGTGGGAAAA GATAGACTGG TTGATGAAGT
TGATACTCAA AACCTTCCTT ACATCAGGGC GATTGTGAAG GAGACATTCC GCATGCACCC ACCACTCCCT GTGGTGAAAA
GAAAGTGTGT GGAAGAGTGT GAGATTGACG GGTATGTGAT CCCAGAGGGA GCATTGATAC TTTTCAATGT GTGGGCTGTA
GGAAGAGACC CTAAATACTG GGACAGACCA TTGGAGTTTC GTCCTGAGAG ATTCTTGGAA ACTGGAGCTG AAGGAGAAGC
TGGGCCTCTT GATCTTAGGG GCCAACATTT CACACTTCTC CCATTTGGGT CAGGTAGAAG AATGTGCCCT GGAGTGAATT
TGGCTACTTC AGGTATGGCA ACACTTCTTG CATCTGTTAT CCAGTGCTTT GACCTGCAAG TGGTGGGCCC ACAAGGACAA
ATATTGAAAG GCAATGACGC CAAAGTGAGC ATGGAAGAGA GAGGTGGACT CACGGTTCCA AGGGCACATA ATCTGGAGTG
TGTTCCAGTT GCAAGGACAA GCGTTGCAGC TAAACTCCTT TCCTAG

>Vigan.01G213300.01
MLLEITIGLL VLALFLHLRP TPTAKSKALR HLPNPPSPKP RLPFIGHLHL LKDKLLHYAL IDLSKKYGPL YSLYFGSMPT
VVASSPELFK LFLQTHEAAS FNTRFQTSAI RRLTYDNSVA MVPFGPYWKF IRKLIMNDLL NATTVNKLRP LRTQQIRKFL
KVMAQSAQAQ QPLNVTEELL KWTNSTISMM MLGEAEEIRD IAREVLKIFG EYSLTDFIWP LKKLKFGQYE KRIDEIFNKF
DPVIERVIKK RREIMRRRKN GEVIEEEQSG VFLDTLLEFA EDETMEIKIT KEQIKGLVVD FFSAGTDSTA VATEWALAEL
INNPRVLQKA REEVYSVVGK DRLVDEVDTQ NLPYIRAIVK ETFRMHPPLP VVKRKCVEEC EIDGYVIPEG ALILFNVWAV
GRDPKYWDRP LEFRPERFLE TGAEGEAGPL DLRGQHFTLL PFGSGRRMCP GVNLATSGMA TLLASVIQCF DLQVVGPQGQ
ILKGNDAKVS MEERGGLTVP RAHNLECVPV ARTSVAAKLL S*