GBrowse Details

Vigan.01G184900.01

Basic Information:
Name: Vigan.01G184900.01
Multiple alignment
Variant Information
Position: Chr01:22096900..22098947 (+ strand)
Length: 2048
Functional Information:
Description: Similar to protein XRI1-like. [XP_004504615.1, Cicer arietinum]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.13,0.28,4.05,1.91,17.00,1.73,8.01, 5.17
Arabidopsis thaliana homolog: AT2G01990.1
Structure :
Position: Chr01:22096900..22097125 (+ strand)
Length: 226
Type: five_prime_UTR
Position: Chr01:22097126..22097240 (+ strand)
Length: 115
Type: CDS
Position: Chr01:22097350..22097522 (+ strand)
Length: 173
Type: CDS
Position: Chr01:22097633..22097726 (+ strand)
Length: 94
Type: CDS
Position: Chr01:22097970..22098134 (+ strand)
Length: 165
Type: CDS
Position: Chr01:22098424..22098704 (+ strand)
Length: 281
Type: CDS
Position: Chr01:22098705..22098947 (+ strand)
Length: 243
Type: three_prime_UTR

>Vigan.01G184900.01 class=Sequence position=Chr01:22096900..22098947 (+ strand)
ATAAATTTTA AAAAACTAAA GTGAACACAA ACACATTTTC AGAATCCCAA GGAACATCCA CTTTTCTCCT CACCCTGCGT
TGACTGACTC ATACTACTAC TATTCCTACT CTTTCTTAAA CTCATCCCTG CTTTTCTGTT TTCTTCCATA ACTTGTACAT
AAATAGACCC TTCTCATCAT TTTTTGTTGC TATCAACTCA CACTGTGTAG TATACCTTGT TACAAAATGA ACAATCTTCA
TTCCCTAGCT TACACTGCTG CTACTACTAG CCTCTGTGGT TCTTCCCTAG GTTGGGATTA TCACAACCTT GGAGTTCTCA
ACGCGGACAA AATGTCTTTA AGTACTATAC TTTTCTTTCT CTTTATATTT CTACCTTCTT GGATAACGAT ATGAATGCAA
ATAACTAGCT AAGTGTTGCA ATGCAATGAT TGATGATATT CAATATGCAG TGGAAGCTAT GGAGGGAAGT ACACCATCAC
TCTCCCCTCA ACATTCTGAT TTCTCAACTG GGTATCTCGA AGATGCTTTG ATTGAATCAT GTGAACGTTC CAAACGTAGA
CGCTTGCTGC CATGTACTAC TGCTGATGAG CATAGCATGA GTTTCATAGA TGACCTTGAG CAGGTACAGA ATTAACCATG
TATACTCTTT GTTTTAGTTT TTCTTTAGAT CAGTTTGATT TTCTCTTGTT CTTTGGTTGA GGCTGAATAT ACATAATGAT
TTCTTCACTT TAGAGTTTCT GGAACTTCAA CCCCTTATGG CACCAACCAG TGGAGAACTT CAACTTCTAC TGCATGAACC
AGATAGAAAG GTTTTGTGGA TTTTCAGGTA TATATATGTC ATATATGCAC TGATTACTAC ACGAGCTCTT AATGATATGG
TCAGTTTGGT TCAGAATGCT ATAATTCCAA ACCAAACACT GAACAATATA AATAATGCTG TTACCTTTGT AATTAAGTTA
TTGAGAAAAG GGGTCCCAGA GAAAAATAAA AAGAATGAAG GAAAAATGTG TTGATGATTG TGCTGTTACT TGTACCCTTT
TTCTAATGTG AAATATCTGA ATTATTGTAG ATGAACTTAT AAGCACATCA AGGAGCGAGG AAGCAAACAT TCTTCTAGCA
GATTCTAAAA CACCGGAAGA GACAATATCA GCCTCTGAAT CTTTAAATTC ATCCTCATCT TCTTACAAAC AACCGGTGAC
ATGCAAAACC ACAGACCCCA CAGTAGCCCC AACAGGTACT ATATTCTCCT TTTCTCTTCT AACTATTATA ATATATAAGG
AAAGGGAAAA ACTTACATAG TTGTTTTTTG GTGTTTTCCT TCTATCAGAA TTGGAGTTTT ATTTATTTCT GAGCAATAAA
AGTTTGCTTT AAAAATTAAA ATATATGACT GATACAAAAC TCCAATTGTA ATCCAATAAC AGCATCAGAA AGAAGTATAT
GGAAACCTGA AAGTGTATCG AAGTTTTGTC CTAATATAGA TTTGTTTGTA TTAAGACATG AATAAATGGT TATTGTATGA
ACAGGAAGTG ATGAAATGGG GAACAAAAAG GTGGTAACAA GAGTGGTGTA TCCATTTGCA ATGGTGAAGC CAGGAGGTAG
GGAAGGTGAT GTGACATTAA ATGACATAAA TGAGAGGATC CTAATGCCTC CTACAAGGCC AGTGAGGCAT CCAGTTGGGG
ACTTTGCATG TCGGCCATGC GTGTCCGCAG AGGGTCCAGG CCTTTCAGGG AAAGCAGTGG TGGCCCTTAC TAGAATTCAC
ACACAGGGAA GAGGCACAAT CACTATTATC AGAACCAAGG GCTAAACAAT ATTCAGCAGT GTTGTGTTAT GGCTTGCTTG
CTTGCTTGCT TGGCTAGCAC CTATCTAGCT TTTACTTCAA GCAGCTTTTT GAGCCTGATT TGCTTTGTTT TCATCAGTCC
TTCTTCCAAT TGTAAAGATG GAAAGCGATA TCTATGTATG TGCATACACC TTATATAATA CTTGAATCTT ATGTTAAAGC
TGTTCTTCTC AGAGATTCTG GCCAAACCTT ACAATTATTT GATTTGAG

>Vigan.01G184900.01
ATAAATTTTA AAAAACTAAA GTGAACACAA ACACATTTTC AGAATCCCAA GGAACATCCA CTTTTCTCCT CACCCTGCGT
TGACTGACTC ATACTACTAC TATTCCTACT CTTTCTTAAA CTCATCCCTG CTTTTCTGTT TTCTTCCATA ACTTGTACAT
AAATAGACCC TTCTCATCAT TTTTTGTTGC TATCAACTCA CACTGTGTAG TATACCTTGT TACAAAATGA ACAATCTTCA
TTCCCTAGCT TACACTGCTG CTACTACTAG CCTCTGTGGT TCTTCCCTAG GTTGGGATTA TCACAACCTT GGAGTTCTCA
ACGCGGACAA AATGTCTTTA ATGGAAGCTA TGGAGGGAAG TACACCATCA CTCTCCCCTC AACATTCTGA TTTCTCAACT
GGGTATCTCG AAGATGCTTT GATTGAATCA TGTGAACGTT CCAAACGTAG ACGCTTGCTG CCATGTACTA CTGCTGATGA
GCATAGCATG AGTTTCATAG ATGACCTTGA GCAGAGTTTC TGGAACTTCA ACCCCTTATG GCACCAACCA GTGGAGAACT
TCAACTTCTA CTGCATGAAC CAGATAGAAA GGTTTTGTGG ATTTTCAGAT GAACTTATAA GCACATCAAG GAGCGAGGAA
GCAAACATTC TTCTAGCAGA TTCTAAAACA CCGGAAGAGA CAATATCAGC CTCTGAATCT TTAAATTCAT CCTCATCTTC
TTACAAACAA CCGGTGACAT GCAAAACCAC AGACCCCACA GTAGCCCCAA CAGGAAGTGA TGAAATGGGG AACAAAAAGG
TGGTAACAAG AGTGGTGTAT CCATTTGCAA TGGTGAAGCC AGGAGGTAGG GAAGGTGATG TGACATTAAA TGACATAAAT
GAGAGGATCC TAATGCCTCC TACAAGGCCA GTGAGGCATC CAGTTGGGGA CTTTGCATGT CGGCCATGCG TGTCCGCAGA
GGGTCCAGGC CTTTCAGGGA AAGCAGTGGT GGCCCTTACT AGAATTCACA CACAGGGAAG AGGCACAATC ACTATTATCA
GAACCAAGGG CTAAACAATA TTCAGCAGTG TTGTGTTATG GCTTGCTTGC TTGCTTGCTT GGCTAGCACC TATCTAGCTT
TTACTTCAAG CAGCTTTTTG AGCCTGATTT GCTTTGTTTT CATCAGTCCT TCTTCCAATT GTAAAGATGG AAAGCGATAT
CTATGTATGT GCATACACCT TATATAATAC TTGAATCTTA TGTTAAAGCT GTTCTTCTCA GAGATTCTGG CCAAACCTTA
CAATTATTTG ATTTGAG

>Vigan.01G184900.01
ATGAACAATC TTCATTCCCT AGCTTACACT GCTGCTACTA CTAGCCTCTG TGGTTCTTCC CTAGGTTGGG ATTATCACAA
CCTTGGAGTT CTCAACGCGG ACAAAATGTC TTTAATGGAA GCTATGGAGG GAAGTACACC ATCACTCTCC CCTCAACATT
CTGATTTCTC AACTGGGTAT CTCGAAGATG CTTTGATTGA ATCATGTGAA CGTTCCAAAC GTAGACGCTT GCTGCCATGT
ACTACTGCTG ATGAGCATAG CATGAGTTTC ATAGATGACC TTGAGCAGAG TTTCTGGAAC TTCAACCCCT TATGGCACCA
ACCAGTGGAG AACTTCAACT TCTACTGCAT GAACCAGATA GAAAGGTTTT GTGGATTTTC AGATGAACTT ATAAGCACAT
CAAGGAGCGA GGAAGCAAAC ATTCTTCTAG CAGATTCTAA AACACCGGAA GAGACAATAT CAGCCTCTGA ATCTTTAAAT
TCATCCTCAT CTTCTTACAA ACAACCGGTG ACATGCAAAA CCACAGACCC CACAGTAGCC CCAACAGGAA GTGATGAAAT
GGGGAACAAA AAGGTGGTAA CAAGAGTGGT GTATCCATTT GCAATGGTGA AGCCAGGAGG TAGGGAAGGT GATGTGACAT
TAAATGACAT AAATGAGAGG ATCCTAATGC CTCCTACAAG GCCAGTGAGG CATCCAGTTG GGGACTTTGC ATGTCGGCCA
TGCGTGTCCG CAGAGGGTCC AGGCCTTTCA GGGAAAGCAG TGGTGGCCCT TACTAGAATT CACACACAGG GAAGAGGCAC
AATCACTATT ATCAGAACCA AGGGCTAA

>Vigan.01G184900.01
MNNLHSLAYT AATTSLCGSS LGWDYHNLGV LNADKMSLME AMEGSTPSLS PQHSDFSTGY LEDALIESCE RSKRRRLLPC
TTADEHSMSF IDDLEQSFWN FNPLWHQPVE NFNFYCMNQI ERFCGFSDEL ISTSRSEEAN ILLADSKTPE ETISASESLN
SSSSSYKQPV TCKTTDPTVA PTGSDEMGNK KVVTRVVYPF AMVKPGGREG DVTLNDINER ILMPPTRPVR HPVGDFACRP
CVSAEGPGLS GKAVVALTRI HTQGRGTITI IRTKG*