GBrowse Details

Vigan.01G139300.01

Basic Information:
Name: Vigan.01G139300.01
Multiple alignment
Variant Information
Position: Chr01:14377535..14382837 (- strand)
Length: 5303
Functional Information:
Description: Similar to Sulfite exporter TauE/SafE family protein, putative. [XP_007025919.1, Theobroma cacao]
GO: Cellular Component: integral to membrane (GO:0016021)
InterPro: Transmembrane protein TauE like (IPR002781)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:11.94,2.97,7.73,3.57,4.55,13.50,2.33 ,10.68
Arabidopsis thaliana homolog: AT1G61740.1
Automatic updates:
Name: NM_001255720 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100803518 (LOC100803518), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:14377535..14378112 (- strand)
Length: 578
Type: three_prime_UTR
Position: Chr01:14378113..14378421 (- strand)
Length: 309
Type: CDS
Position: Chr01:14378813..14378959 (- strand)
Length: 147
Type: CDS
Position: Chr01:14379043..14379177 (- strand)
Length: 135
Type: CDS
Position: Chr01:14381759..14382715 (- strand)
Length: 957
Type: CDS
Position: Chr01:14382716..14382837 (- strand)
Length: 122
Type: five_prime_UTR

>Vigan.01G139300.01 class=Sequence position=Chr01:14377535..14382837 (- strand)
CGAAATTATG TTACAACAGT AAAGAAGCCA ACAGCCCTGT TAAGATTGGC CTCAACATGT CACTGTAATC CTTAAAGAAT
CTGAATTTTG TTATGTGAGA CATTTTCATC TCATTGTGTT GTATGATCCT ATTTGCTTTT GCTTATTTTC AAAAGGTTTT
GTTACCGTTC TCTCTGTATC CTTATATAAA GGCATTGCAC ATTCAGTTAT TCAATCAAAC ACCTTGCAGT TTTCTTCAAG
TTCTCAAACG AATGCAGATT TTTCACAGCC TCACATTTTT TGTTCTTACC TTCATCTCCT TCAATCCTTG TAATGCAGAA
CAAGCACAGA CTATTCTAGA CGCCCTTGGC AGTAACCATT TCTTAGAGAA AATATATGAA TGGGGAAATG GTGCACAAGG
ATTCCAAGAA GCTCAGATTG AATTTTCAGG TCCTATAGTG CTGGCAGGAG TGTTGTGCTT CATTGCTTCT TCTATATCCA
GTGCTGGTGG CATTGGTGGT GGTGGCCTTT TCATTCCCAT ATTGACTATT GTGGCTGGCC TGGACCTCAA AATAGCTTCA
AGTTTGTCAG CTTTCATGGT CACAGGAGGG TCGGTTGCAA ATGTCTTGTG CAATCTTTGT GCCACAAGCC CTAAATTTGG
TGGCAAGTCA TTGATTGACT ATGACATAGC ACTTTTGTCA GAACCATGTA TGCTGCTAGG AGTGAGTGTT GGAGTCATAT
GCAACCTTGT ATTCCCAGAA TGGTTGATTA CTATGTTGTT TGCTGTCTTT CTCACTTGGT CTACCTCAAA GACCTGCAAC
AGTGGAGTGG TATTTTGGAA GATTGAATCA GAAGAAAGGA GGAAAAAGCA TGGATTTGAG GGGCTTGAAA ACAGACTATT
AGAAAATGGG AATGAAGTAA GGGAAGGGGG AGTGCAGGTG AACAAAGAAA AAGAAGAGAT GAAAAGTGTT GAAGAACAGG
TTGTGGTTCC TGAAGAAAAT ATCAGGGTGA AAATCCCTTG GCTGAAATTG GTGGTCTTAC TCTTGGTCTG GTTCACTTTC
TTCTCCCTTT ATCTTCTTCG TGGCAATAAA TATGGACAGG TTAGATTTTT CTCGTCCTTA CTTTTTGCTG TGTAGTGATG
TTATAAATTC ATTAAACCTG ATTAATTTAC TTGAGATACT ATGATTTGTG ACACTGATAT TACAATTGAA TTCATAAATG
TCAAGTTATA AATAAGCATA AGAAGAACTA ACAAATTTCA GGTTTCGGGT TAACTCCCGG TTAACAAAAT ACTAATAGCT
AACATTTGTC TATAAAAAAA AAAGCATAAG AACAATGTCC CAGGTTGACT CAATTCGAGA TTGAGGGTGT CTTTAATTTC
TATTTCCAAA AAATTATTTG AGTAAGTACT CAAGCAAAGT TGGTCAGAAT GATGTGTGAG AACTGTGTGT GCAAGTTGTT
TGAATCTGTG TAGAGTGTGT GCGTGAGTTT GTAGAAAGTT CAACTGGTAG TGCAGGGTGA GTCTCATCTT CTGAGTGCAA
AGTAACCGCT GTGGGTAGGG CTGGGTTGAG GTAAAGGTAT AAGAGACATC AAGAAGCTAT AGTGTAACTT TCTTTCTCTT
AATTCTTGAA TGCAATACTA CTTGTTTTTC CTTTTTCTCA ATTCCAATTT AATTCTGCAA GTTTTCCAAT GAGTTTTACC
GTCTGCACCC TTTTTCTATT CTTTGTTGAT TCTAATGTTT CTACCCATTT ACAATTCATT TCTTCTATTG TCCTTTTAAT
TCTTGCACTG CACTTTACTA CATCCAATTG TTTTTGATTT ACGATCCAGT GTTTTTACAG TTTACTCTGA TTGTGCTAAT
CTCTTCAATC TTGGATTGTT ATTTCTGATT TGATTTTCTT GAATCTGATT GCATGAGTTG AACTTGAAAA CTTTACAAAA
TTGATTTTCA GTTATTAGAT CATTGACAGA TATGTGTTAG TATAGTTTAG GTAATTACAT CTTTGGTTAC TAAGTTTAAT
TCTGAATATG GATTTGGCAT TTGTGCATTA TTGTGATTCT GTTAGGTTTC TGGGAAGCAC GAAACCAGTT TTCTGATCTA
ATATAAGAAT TAAACACTCA AACCTTATAA TGTAACATAA ATTAACACTT GAATTAAGGA AATACGAAAC TGAGAAAGCA
TTCAACAGCA TCCAAGGGAA GTAAATCCCT TCTTACAGGA AACACCCTGT CCAAAATAAC AAACTTACAC ACCCTCCCAG
GAGGAACCGT TTCCTCCTGA AAAGAAACTC ATATTACATA AAAACTACAT TATTACATAA TAACTACCTT ACTAACCACT
CCCCTAAACC GTCCAACCCC TTTTACTGTC ATGTAACTTC TTATTTGAAT TCTTCCTTCT AACATACACC TTTAAAATCC
TATCAGATTC TAGTTTTTGC AAGTTGAGAT TGATTCTGTT TTAGAATTTT ACCCAATAGG GGATTTTTGG TTCTGCTAGT
CTTTTAGTTC AATTAGTTAT GTTTAGGATC AATTTACATT GCATTGGTTG TGTTTGCATC AGTGGCATAT TAGTTAGATT
ATCTTAGCGC ATATAATCTG AAGTCACAGT TTACACTCTA GCTAGGTTGT CACGCTAGTT GCTACCAGCC TGTGTTATAA
CTTGTGATTT TGAGATTTCA ACATAGTTTT AAATTTTGCA TTGCATTTCT AGTGTTATCA TAATATTGTA GACTTGTTTG
AACCATTGCA TCTGTACTTC ATCTCCATTC ATATTAGTTT GCATCTAGCA ACCAGTATAG CATTCCGTAT CAGCATTCAA
AAATCCTGAT ATGTGTACCA GTGTTGTTAA ACTGTAAAAC GTGGTTTCCA TCTGTGATCT TTAGTTCTGC GCATAGTATA
CGTGTTCAGA TGGCATCTTT CATTCATTCT TATCATTTAA AACTTGTTAT ACCCATTGCA TGTGCATATT CTGCATTAGC
GCCCAAGGAA GGCAGAATTG GCTTTGAACC TGTGTTCATA AGCTGTCAAA GCTTCCAGAC TTGCTTTCCA TAAATGATTT
TCATTTTTTG CATCCTTCTT TGTGACCCAA TTGCATATTT TGCATTATTA GGATATAGTG GACATGTTTC ATACACTCTC
ATTTGGAATT CTTTGAGGAC TTTCATCGAA CAGATTAATC ACTCATGCAT TATTTTTCTT CATTTTAAAT AGCCAGGCAC
ATTCCATTGC ATCATTCTAA TAGTTTAAAG TTATCATTCT CAGTATCTAA CCATTCTAAT AACATTTCAC CATGCATTAG
GTATACTAAT AGAGCATAGT GTAGAATTGA GGAAGAAGTT AAAAATGATG AAAACATCTT ATCTAGTTTC TGTTTTTCAT
TTTAAAATAT TTTTGGAAAC CGTCTTCAAA ATTTAGTAAA CTTTAGATGA GAAATTGATG CTAAGTAACA TATAATTAAA
TAGTTTTTAA AAGCAAAAGG TGAGAGAAAA ACAAAATCCT CATAATTATG TTGTCTATTT TTCTATCTTT TGTTGTGATT
TTAAGTCTTT TCATTCTATT ATAGCTGTTA GATGTACTTT TTGTAAGGTT TCTGATAGTG ATATTAATTC CTTTAGTTTG
GAGATGTCAC TATATATGCA TTTGATGACT GAACTTGTGA TGCAATTGTT GAAACAATAG AGTATCATTC CAATGGAACC
ATGTGGTGTG GGATACTGGA TTCTTTCATC AGCTCAACTC CCTCTTGCCT TGTTTTTCAC TGCGTGGATT GTGTACAGAA
AAGATAGCCA TCAAGATGAA AATCTCATGA CCGAGGTTTT TAAAACATCA TAAACACTGA AAATTAATTC TTGAATGTTG
CTTAAAGTTA CAACCTCATT CAGTCAAATT GGATGCAGGA CCCATGCCTA TCCTCAAGAG GACCCTCAAA CAAGCTTATA
TTTCCAATAA TGGCATTGCT AGCAGGGATA TTGGGTGGTG TCTTTGGAAT TGGTGGTGGA ATGCTGATAA GTCCACTTCT
TCTGCATGTT GGAATAGCTC CTGAGGTTAG TTCCATGAAC ATATGGACAT AAGATGTATT TCCTTCTATC TTCAACATAA
TAAAAACAAT ACATATTGAT TAAAAATGTC ATACTTTTTT AATTTTCTCA ATCTTATCAT TTCTAAACTA CCCTTCTATG
GAAAAGTTCA AATTTATGAA AACTTGTTGC ATTTAAAGGT CTTGTCTTGT GGTTGATATC CCAAGAACCA GAAGATTAGT
TGATATTTGA ACAAACATTA ATCATTTTTT TCTTATATTT CATACCAGAA GGAACATATC ATGATGATTA ACATTAGGCA
TTAGTGGCTA GTCCAATCCA TCAACTCACT AATGATTACA GTGGCTTGGC TAATAAACTG GCATTGACTC AGCATTCAAA
TTATTTCGTT GTATAGGTGA CAGCAGCAAC ATGTTCTTTC ATGGTTTTCT TCTCATCTAC CATGTCAGCA TTGCAGTACC
TATTGTTGGG CATGGATCAC ATAGAGACTG CCCTAATGTT GGCCATAGTA TGTTTTGTTG CATCACTTAT TGGATTGTTG
GTGGTGCAGA GAGCAATTCA AAGCTATGGA AGACCATCCA TAATAGTATT TTCGGTTAGC ATAGTGATGA CTTTAAGTGT
TGTTCTAATG ACTAGCTTTG GGATGATTCG AACTTGGAAA GACTATGTAT CAGGGAGATA CATGGGATTC AAACTACCAT
GTTGAAAAAC CCAATTTTGT TCTATTAGTA TCTCACTCTG TCACTGAATC AGCTACAACT TTTTGACCTT TTGTATTAAT
GCAGCAAGAC ACTTTACTAA GGAAGACTAG CATTTTTTGA TGATATGATA TTTTCGGATG AAGAACATGC GACAACTTCC
CAGAAAAACA TAAATAAAAG TTGTCATCAT TGTTGAAAGA AATTCTCTTT ACATATTTTG TCACAAATAA GAACCTAACA
AGTGTTGGTT GAAGAAAGGA TTGAAGACCC TTCACCTGTG GTCTTGGTTC CATGACGAGG TTTTTATGTT ACAAGGACAA
AATACAGTTC AAAAGAGTCT CTCTTTCGTG CCTAACAGTT CCTTTAAAGA GTTAGAACAC CAAAACGTAA GAAAATTGAT
GAAATTGAAG ATCTAGCTTT CAATTTTCAA TGTTCTCTTT TACTGGAATT ATCAAAAAGT GAAAGATGTA TTATCTAAAG
AATTAACTCT AAATTTTTAC TCACATTTGT GTATATAATA TAACTGAGGA CCATATTATA AAGCTAAGTA AGAGAGGCAC
AAAGTTATAT GGCTTTTGTA GTA

>Vigan.01G139300.01
CGAAATTATG TTACAACAGT AAAGAAGCCA ACAGCCCTGT TAAGATTGGC CTCAACATGT CACTGTAATC CTTAAAGAAT
CTGAATTTTG TTATGTGAGA CATTTTCATC TCATTGTGTT GTATGATCCT ATTTGCTTTT GCTTATTTTC AAAAGGTTTT
GTTACCGTTC TCTCTGTATC CTTATATAAA GGCATTGCAC ATTCAGTTAT TCAATCAAAC ACCTTGCAGT TTTCTTCAAG
TTCTCAAACG AATGCAGATT TTTCACAGCC TCACATTTTT TGTTCTTACC TTCATCTCCT TCAATCCTTG TAATGCAGAA
CAAGCACAGA CTATTCTAGA CGCCCTTGGC AGTAACCATT TCTTAGAGAA AATATATGAA TGGGGAAATG GTGCACAAGG
ATTCCAAGAA GCTCAGATTG AATTTTCAGG TCCTATAGTG CTGGCAGGAG TGTTGTGCTT CATTGCTTCT TCTATATCCA
GTGCTGGTGG CATTGGTGGT GGTGGCCTTT TCATTCCCAT ATTGACTATT GTGGCTGGCC TGGACCTCAA AATAGCTTCA
AGTTTGTCAG CTTTCATGGT CACAGGAGGG TCGGTTGCAA ATGTCTTGTG CAATCTTTGT GCCACAAGCC CTAAATTTGG
TGGCAAGTCA TTGATTGACT ATGACATAGC ACTTTTGTCA GAACCATGTA TGCTGCTAGG AGTGAGTGTT GGAGTCATAT
GCAACCTTGT ATTCCCAGAA TGGTTGATTA CTATGTTGTT TGCTGTCTTT CTCACTTGGT CTACCTCAAA GACCTGCAAC
AGTGGAGTGG TATTTTGGAA GATTGAATCA GAAGAAAGGA GGAAAAAGCA TGGATTTGAG GGGCTTGAAA ACAGACTATT
AGAAAATGGG AATGAAGTAA GGGAAGGGGG AGTGCAGGTG AACAAAGAAA AAGAAGAGAT GAAAAGTGTT GAAGAACAGG
TTGTGGTTCC TGAAGAAAAT ATCAGGGTGA AAATCCCTTG GCTGAAATTG GTGGTCTTAC TCTTGGTCTG GTTCACTTTC
TTCTCCCTTT ATCTTCTTCG TGGCAATAAA TATGGACAGA GTATCATTCC AATGGAACCA TGTGGTGTGG GATACTGGAT
TCTTTCATCA GCTCAACTCC CTCTTGCCTT GTTTTTCACT GCGTGGATTG TGTACAGAAA AGATAGCCAT CAAGATGAAA
ATCTCATGAC CGAGGACCCA TGCCTATCCT CAAGAGGACC CTCAAACAAG CTTATATTTC CAATAATGGC ATTGCTAGCA
GGGATATTGG GTGGTGTCTT TGGAATTGGT GGTGGAATGC TGATAAGTCC ACTTCTTCTG CATGTTGGAA TAGCTCCTGA
GGTGACAGCA GCAACATGTT CTTTCATGGT TTTCTTCTCA TCTACCATGT CAGCATTGCA GTACCTATTG TTGGGCATGG
ATCACATAGA GACTGCCCTA ATGTTGGCCA TAGTATGTTT TGTTGCATCA CTTATTGGAT TGTTGGTGGT GCAGAGAGCA
ATTCAAAGCT ATGGAAGACC ATCCATAATA GTATTTTCGG TTAGCATAGT GATGACTTTA AGTGTTGTTC TAATGACTAG
CTTTGGGATG ATTCGAACTT GGAAAGACTA TGTATCAGGG AGATACATGG GATTCAAACT ACCATGTTGA AAAACCCAAT
TTTGTTCTAT TAGTATCTCA CTCTGTCACT GAATCAGCTA CAACTTTTTG ACCTTTTGTA TTAATGCAGC AAGACACTTT
ACTAAGGAAG ACTAGCATTT TTTGATGATA TGATATTTTC GGATGAAGAA CATGCGACAA CTTCCCAGAA AAACATAAAT
AAAAGTTGTC ATCATTGTTG AAAGAAATTC TCTTTACATA TTTTGTCACA AATAAGAACC TAACAAGTGT TGGTTGAAGA
AAGGATTGAA GACCCTTCAC CTGTGGTCTT GGTTCCATGA CGAGGTTTTT ATGTTACAAG GACAAAATAC AGTTCAAAAG
AGTCTCTCTT TCGTGCCTAA CAGTTCCTTT AAAGAGTTAG AACACCAAAA CGTAAGAAAA TTGATGAAAT TGAAGATCTA
GCTTTCAATT TTCAATGTTC TCTTTTACTG GAATTATCAA AAAGTGAAAG ATGTATTATC TAAAGAATTA ACTCTAAATT
TTTACTCACA TTTGTGTATA TAATATAACT GAGGACCATA TTATAAAGCT AAGTAAGAGA GGCACAAAGT TATATGGCTT
TTGTAGTA

>Vigan.01G139300.01
ATGATCCTAT TTGCTTTTGC TTATTTTCAA AAGGTTTTGT TACCGTTCTC TCTGTATCCT TATATAAAGG CATTGCACAT
TCAGTTATTC AATCAAACAC CTTGCAGTTT TCTTCAAGTT CTCAAACGAA TGCAGATTTT TCACAGCCTC ACATTTTTTG
TTCTTACCTT CATCTCCTTC AATCCTTGTA ATGCAGAACA AGCACAGACT ATTCTAGACG CCCTTGGCAG TAACCATTTC
TTAGAGAAAA TATATGAATG GGGAAATGGT GCACAAGGAT TCCAAGAAGC TCAGATTGAA TTTTCAGGTC CTATAGTGCT
GGCAGGAGTG TTGTGCTTCA TTGCTTCTTC TATATCCAGT GCTGGTGGCA TTGGTGGTGG TGGCCTTTTC ATTCCCATAT
TGACTATTGT GGCTGGCCTG GACCTCAAAA TAGCTTCAAG TTTGTCAGCT TTCATGGTCA CAGGAGGGTC GGTTGCAAAT
GTCTTGTGCA ATCTTTGTGC CACAAGCCCT AAATTTGGTG GCAAGTCATT GATTGACTAT GACATAGCAC TTTTGTCAGA
ACCATGTATG CTGCTAGGAG TGAGTGTTGG AGTCATATGC AACCTTGTAT TCCCAGAATG GTTGATTACT ATGTTGTTTG
CTGTCTTTCT CACTTGGTCT ACCTCAAAGA CCTGCAACAG TGGAGTGGTA TTTTGGAAGA TTGAATCAGA AGAAAGGAGG
AAAAAGCATG GATTTGAGGG GCTTGAAAAC AGACTATTAG AAAATGGGAA TGAAGTAAGG GAAGGGGGAG TGCAGGTGAA
CAAAGAAAAA GAAGAGATGA AAAGTGTTGA AGAACAGGTT GTGGTTCCTG AAGAAAATAT CAGGGTGAAA ATCCCTTGGC
TGAAATTGGT GGTCTTACTC TTGGTCTGGT TCACTTTCTT CTCCCTTTAT CTTCTTCGTG GCAATAAATA TGGACAGAGT
ATCATTCCAA TGGAACCATG TGGTGTGGGA TACTGGATTC TTTCATCAGC TCAACTCCCT CTTGCCTTGT TTTTCACTGC
GTGGATTGTG TACAGAAAAG ATAGCCATCA AGATGAAAAT CTCATGACCG AGGACCCATG CCTATCCTCA AGAGGACCCT
CAAACAAGCT TATATTTCCA ATAATGGCAT TGCTAGCAGG GATATTGGGT GGTGTCTTTG GAATTGGTGG TGGAATGCTG
ATAAGTCCAC TTCTTCTGCA TGTTGGAATA GCTCCTGAGG TGACAGCAGC AACATGTTCT TTCATGGTTT TCTTCTCATC
TACCATGTCA GCATTGCAGT ACCTATTGTT GGGCATGGAT CACATAGAGA CTGCCCTAAT GTTGGCCATA GTATGTTTTG
TTGCATCACT TATTGGATTG TTGGTGGTGC AGAGAGCAAT TCAAAGCTAT GGAAGACCAT CCATAATAGT ATTTTCGGTT
AGCATAGTGA TGACTTTAAG TGTTGTTCTA ATGACTAGCT TTGGGATGAT TCGAACTTGG AAAGACTATG TATCAGGGAG
ATACATGGGA TTCAAACTAC CATGTTGA

>Vigan.01G139300.01
MILFAFAYFQ KVLLPFSLYP YIKALHIQLF NQTPCSFLQV LKRMQIFHSL TFFVLTFISF NPCNAEQAQT ILDALGSNHF
LEKIYEWGNG AQGFQEAQIE FSGPIVLAGV LCFIASSISS AGGIGGGGLF IPILTIVAGL DLKIASSLSA FMVTGGSVAN
VLCNLCATSP KFGGKSLIDY DIALLSEPCM LLGVSVGVIC NLVFPEWLIT MLFAVFLTWS TSKTCNSGVV FWKIESEERR
KKHGFEGLEN RLLENGNEVR EGGVQVNKEK EEMKSVEEQV VVPEENIRVK IPWLKLVVLL LVWFTFFSLY LLRGNKYGQS
IIPMEPCGVG YWILSSAQLP LALFFTAWIV YRKDSHQDEN LMTEDPCLSS RGPSNKLIFP IMALLAGILG GVFGIGGGML
ISPLLLHVGI APEVTAATCS FMVFFSSTMS ALQYLLLGMD HIETALMLAI VCFVASLIGL LVVQRAIQSY GRPSIIVFSV
SIVMTLSVVL MTSFGMIRTW KDYVSGRYMG FKLPC*