GBrowse Details

Vigan.01G043200.01

Basic Information:
Name: Vigan.01G043200.01
Multiple alignment
Variant Information
Position: Chr01:3136349..3141081 (+ strand)
Length: 4733
Functional Information:
Description: Similar to Uncharacterized protein. [K7L4J5, Glycine max]
GO: Biological Process: carbohydrate metabolic process (GO:0005975)
Biological Process: galactose metabolic process (GO:0006012)
Biological Process: cellular metabolic process (GO:0044237)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: UDP-glucose 4-epimerase activity (GO:0003978)
Molecular Function: racemase and epimerase activity, acting on carbohydrates and derivatives (GO:0016857)
Molecular Function: coenzyme binding (GO:0050662)
InterPro: NAD-dependent epimerase/dehydratase (IPR001509)
UDP-glucose 4-epimerase GalE (IPR005886)
Nucleotide sugar epimerase (IPR008089)
NAD(P)-binding domain (IPR016040)
UDP-glucose 4-epimerase C-terminal domain (IPR025308)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.07,1.22,12.34,1.98,2.96,5.25,7.87,3.69
Arabidopsis thaliana homolog: AT1G64440.1, AT4G10960.1, AT4G23920.1
Automatic updates:
Name: NM_001255031 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max UDP-glucose 4-epimerase GEPI48-like (LOC100812565), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:3136349..3136548 (+ strand)
Length: 200
Type: five_prime_UTR
Position: Chr01:3136549..3136728 (+ strand)
Length: 180
Type: CDS
Position: Chr01:3137351..3137400 (+ strand)
Length: 50
Type: CDS
Position: Chr01:3137542..3137677 (+ strand)
Length: 136
Type: CDS
Position: Chr01:3138198..3138299 (+ strand)
Length: 102
Type: CDS
Position: Chr01:3138478..3138705 (+ strand)
Length: 228
Type: CDS
Position: Chr01:3139175..3139253 (+ strand)
Length: 79
Type: CDS
Position: Chr01:3139563..3139645 (+ strand)
Length: 83
Type: CDS
Position: Chr01:3140310..3140401 (+ strand)
Length: 92
Type: CDS
Position: Chr01:3140704..3140800 (+ strand)
Length: 97
Type: CDS
Position: Chr01:3140801..3141081 (+ strand)
Length: 281
Type: three_prime_UTR

>Vigan.01G043200.01 class=Sequence position=Chr01:3136349..3141081 (+ strand)
AAAGTAGCAC TTGAGACTTT AGATTCAAAA AAATCTCATG ACTTTGTTGT GAACGTGTTA CTCACAGAAT TCTCGCCTTC
TCCTGGCGCG TAACAAACTC GTAGCTTTTC CACTGCCATA ACTCATCCTT CTCTTTCGCT ATTCTGTTCA CGCATTCTTG
TATTCTTCCG TTTTTTTCTC TCCTGCCAAA AACTTTCGTT ATGCCAATGA TTCTGGTTAC CGGTGGTGCC GGATACATTG
GTAGCCACAC CGTCCTCCAG CTTCTCCTCG CCGGTTACAA CGTATTGGCC GTCGACAACT TCGACAACTC CTCTGCAGTC
TCCATATCCA GAGTCAAGGA ACTCGCCGGA AAATTGGCAA AGAACTTTTC CTTTGTCGAG GTACCGGGTT TCGACGGTTT
TCTTTTTTAT TCTATTTGAA AAACAAAAAC CCAATTTTGA TTGTTGCATG GTCCTCAGAA TATGATGGTT GTGGTTTTTT
CGTTGTTGAT TTCGATTTAA CGTTTTTATT TTTTCGATTT TTTGTCTCTG TCTTGAGTTT GTGTGATTTT TTGAGTTTTT
CACCGGGCCT GTAAACTGTG GTGGCCCCAC TGACAGGTAA AAGAAAAAGT GTTGCGATGC GCTTTATTCC GTAGTTTGGT
AAATACCAAA CAAACAGACG GTGACAAGTT CGAATTATGT TTTTCTGCGT TTCGTGACAG TTTGGAACTA ACTCTGTCTG
TTTCACAATT AGTGTGACAA GTGTACACAC TGTACTTTTG ATGTGATGTG TGTTTTGTGA TTTGTTGTAT TGCTTTCCAT
GATTCCAATT TTATTACCAA TAAAAACTAT ATTCTGTATT CTATATCCTG TATTTGTGTT TTTTCTCTCT CTAAAGTTCA
ATTTTAAGCT AAATTCTTGT CTGTTTCGGT GCAGGTTCTT GTTTTTGTTT ATTAGACGTT CTTAATTATT GATACTTTAT
TGTGGTGCTG ATTGGCTCTT CGTTTTATTT TTCCTGCTGC AGTTAGACTT GCGGAACAGA GCTGCGCTCG AGAAAGTTTT
TACAAACCAA AAGTAAGTAT TGTGAAGAAT TTTTTGTAAT TGAGAAAAGG AAAATAATGA TTTCTGTCGG TGCTTCACGT
TCTATTGTAG TTATATTCGA TAGATGATTG GTAAATAAAA GCTGTTTGTC ATGTATGTCT CTTTTTCCTG CAGGTTTGAT
GCTGTCATAC ATTTTGCTGG GCTGAAAGCA GTCGGTGAAA GTGTGCAGAA ACCACTACTG TACTTTGACA ACAACTTGAT
TGGGACAATC ATTCTATTTC AAGTCATGGT TGCCCATGGA TGCAAGAAGG TGTGCTCATT TTAGTTTTGA TCTTATTGCT
GATAAAAGAA AAAAATTAGT TTTGATCTGT TGGGTCTGTT TTGATTGGCA TCAACTGCAT GGAAAAATGT AGCAATATTG
ATGAATATTG TCATACTTCC ATTGCATCAA TCTGTGAGAC CACAATCAGC CGAAGTGTTC CCCCATTAAA GACTGATGAC
AAGTAGACTC CTTTACAACC ATACATTCCA TCAACACTCA TTTTTCCCTA TTTCTGTTTC TATGAGATCA TATCACCTGT
TGAACCCCTC TGTTTCCCTA TCTAGGGTTA ACTGCATATC AATGTTCACC AATTCTCTTC CACACTAAAT TACAGTTGTT
TGTTAAAAAA ATATTAATTA GAAGCAACAT CTTAAGATGA AGTCTGAACC TTTTTCTTTT TATGGTCCCC TGCTATCTTG
AAGTTTCTTG TGGAATTTGT TGCGCATATA TTTTATTGAT GCTTCAATCT GAATATTTGA CTGATTTTAT ATTTCTTGAA
TGATGTCAGC TTGTGTTCTC ATCTTCAGCA ACTGTATATG GCTGGCCAAA GGAGGTTCCA TGTACCGAAG AATTCCCTTT
GTCATCGACA AACCCATATG GAAGGACCAA GGTATGAGTA GGAGATTGTT ATACAGTAAA ACTGAAGATG CTCTAATGAT
GACTCTTTGC AAAATGAAAA AAGTGGTTTT CTATTTTAAT TTTATAATTT TTGAGTATTA CTGATAGCAA TGTACTATGT
TTTGTCTTGG AAACGGACAA TAACATCGAT GAGAGGTTTG TTTTTTCAGC TTATCATCGA AGAGATGTGT CGTGATCTCT
ACTGTGCGGA TTCAAATTGG AAAATTATAC TGTTGAGATA CTTTAATCCA GTTGGTGCAC ATCCTAGTGG TTTTATTGGT
GAGGATCCTC GTGGAGTTCC GAACAATCTC ATGCCCTTTG TTCAACAAGT GGCAGTTGGC AGACTCCCTT CACTGACAGT
TTTTGGAAAC GATTATAAAA CATGCGACGG CACTGGAGTA TGTTATCACT TTTTTGAATT GGTTTAGTGA ATTTTTTCCT
TTGTAAAGAT TGCATGCAAT CTTCACCCCC ACTCCCTCCT ATAAAAACTT TAGATGAGAT ACAAGTGACC TTAGACTAGT
CCACAGACCA TATTGCTAAA ATAATAAGAT AAAACTAACA TAGAAATATT CCCATTAATT TGATTGTCAT GTGTAAAGAG
ACAAAGGGCT TATTAGAGAT GTGATTAACA ACTAATAGAC ATTTCTAACA ACCTAACTAA CAAATTCCAT CTAGTTAATA
CAACTAACAG TTGACTAATA TCCTGTAATG ATACACCTTT TCCCTTTGGT TTGGAATGTT TCAATGATTT TGGACATCCT
GAGCTTTCAT AGTCTCAGTT TGCCAAATTG TTACAAGCAT TCATTCTCAT TTCTAAAAGC TGCCTTTGAT TTCTTCAAGG
ATCTTACATA ATTTTTTTTT TCTCAGGTTC GCGATTACAT TCATGTTGTT GACTTAGCAG AAGGGCACAT TGCTGCTTTG
CGTAAACTGG ATGATCCTAA AATAGGTATT ATTCCCAATC TATTATTTTC TTCTAATAAT TTACTAGTGT TTTCGATTTG
GTAAACCCTG AAAGATTGTG AATGTGAAAT GATTTTTTAT CTGTACAAGC AATGATAACT TTTCCTATTG GCCCATTTTG
TTTTGGATTT TCCCTTTTTA GTATGTGACT TTGTTAAATA ATGAGCTGAA ACCTCGGTCT TAACCAAAGT CAAATACTGC
CAAATGATCT GGGTTGCTCA CTTAAGCGAA TGAGATAAGG CTTTGTTGTT GTCGTGTAGT TACCTTGATA AAATTTTATT
GATTGTTTAA ACAGGTTGCG AAGTTTATAA CTTGGGAACA GGAAAGGGAA CATCAGTTTT GGAGATGGTA AAGGCTTTTG
AACAGGCCTC TGGAAAGGTA ACAGAGTGAT AGTTTTATTT CTGTTTTTGT TTTGTGTAAT ATAAACCTTG TCATTTTATA
CAAACGCAAT TTTGTTTCTT TCTATTGTCC CGGGACTTCA AATTTTGCAG CGTAACATTC ATTTGAAATG CCTAGCATCT
CTTAATCAGT TGCATTCTGA TAACATACAA TGAAATGGAA GAAGTGTGAA GCAAATTCAA CTGTGTAGTT ATTGGACTGT
CATTAGTATG TCCTGGAGCA TTCCTCTGGT TTTTTTGAAT CTTAAGTACA TATTTATCTC TTTCCGACTG CTACAAATTC
ATGGATCAAA GGAATAGAGA TCAAACTCAT AAAGAGAGAT GGAGAGCATG CTTACACTCA ATAGAAGATA TACATTTGAG
GCTCTTATTT ATTGAGAGCT TATTCTGGTC TAATTCTATA AACTAAGCAG TAACTACTAA ACTGAAACTA CAATGAACTC
CAGGATCTCC GTGACTGACT ACTACAGATT CACTGAGCAA CAAAAGTTTT AGAAATCAAA CATCTGCCCA TTATATACAA
CAAACGTGTT GAATTTCTAG TGTTTAAGGA GATAAACTGA ACCAACTCTT TTATAATATA TCTGGATTAA GCTACTCTTC
AGTACATGAC TAATTCAATT TCACAATTTA TTATTGTTCA GAAAATTCCA CTTGCAATGG GTGGTCGTAG ACCTGGAGAC
GCTGAAATTG TTTATGCTTC AACGAAGAAA GCGGAAAAAG AACTTAATTG GAAGTAAGTG TTGATTTGCA TCAAAGTGAA
CAATAGCCAC CTTTTTTTTT TCTGTCTTAA GGCTCAGTTT TTTTGCCTTA AGTTTATAAT TTCTTTCATT GTCATTACCG
TCCTTGTGAA AATCACCGCC GTGTTATTTA ATGACCGAAT GATTTCACGT CAATTCAAAA CTCTTTTTAT TGTGTCAAGC
TGCAACCAAT ATTCAAATGT TTTCATCTTT CGGTAAAAAA TATTGGGCAA GGTTTCTCGA AGTTTTATTT CCTCCCCTTT
TTTATTTCTT TCTCACAAAT TTATTGTCGT TGCAGGGCTA AACACGGGAT CGATGATATG TGTCGGGATC AATGGAACTG
GGCTAGCAAA AACCCTTATG GCTATGGTAG ATCTGGAGAT TCCCCCAAGT GATGCTTATG ATTGTTAGAT TAAGTATAGA
TGTTTTCTTT TGGGGTCTTT TTGAACCCTG TCTCCCAATA GGTCCTAAAG TTCTTACTTA GCCTTTCTAA GATAGAAAAT
CCTTTCTTAA TTATGAATTT CAATAATGTG GTAAATAAGT AGTGGTTTTG TTTTGCTTTA GTTATTCTTT TCGGTTTCCC
GCTTACAGTA TGAGCATTTT CATGATCTTC AAGAACGTAT TTATAAATCT AAACCACACA TTATAGATTA TGACTAACGA
GTAATATCAT GCC

>Vigan.01G043200.01
AAAGTAGCAC TTGAGACTTT AGATTCAAAA AAATCTCATG ACTTTGTTGT GAACGTGTTA CTCACAGAAT TCTCGCCTTC
TCCTGGCGCG TAACAAACTC GTAGCTTTTC CACTGCCATA ACTCATCCTT CTCTTTCGCT ATTCTGTTCA CGCATTCTTG
TATTCTTCCG TTTTTTTCTC TCCTGCCAAA AACTTTCGTT ATGCCAATGA TTCTGGTTAC CGGTGGTGCC GGATACATTG
GTAGCCACAC CGTCCTCCAG CTTCTCCTCG CCGGTTACAA CGTATTGGCC GTCGACAACT TCGACAACTC CTCTGCAGTC
TCCATATCCA GAGTCAAGGA ACTCGCCGGA AAATTGGCAA AGAACTTTTC CTTTGTCGAG TTAGACTTGC GGAACAGAGC
TGCGCTCGAG AAAGTTTTTA CAAACCAAAA GTTTGATGCT GTCATACATT TTGCTGGGCT GAAAGCAGTC GGTGAAAGTG
TGCAGAAACC ACTACTGTAC TTTGACAACA ACTTGATTGG GACAATCATT CTATTTCAAG TCATGGTTGC CCATGGATGC
AAGAAGCTTG TGTTCTCATC TTCAGCAACT GTATATGGCT GGCCAAAGGA GGTTCCATGT ACCGAAGAAT TCCCTTTGTC
ATCGACAAAC CCATATGGAA GGACCAAGCT TATCATCGAA GAGATGTGTC GTGATCTCTA CTGTGCGGAT TCAAATTGGA
AAATTATACT GTTGAGATAC TTTAATCCAG TTGGTGCACA TCCTAGTGGT TTTATTGGTG AGGATCCTCG TGGAGTTCCG
AACAATCTCA TGCCCTTTGT TCAACAAGTG GCAGTTGGCA GACTCCCTTC ACTGACAGTT TTTGGAAACG ATTATAAAAC
ATGCGACGGC ACTGGAGTTC GCGATTACAT TCATGTTGTT GACTTAGCAG AAGGGCACAT TGCTGCTTTG CGTAAACTGG
ATGATCCTAA AATAGGTTGC GAAGTTTATA ACTTGGGAAC AGGAAAGGGA ACATCAGTTT TGGAGATGGT AAAGGCTTTT
GAACAGGCCT CTGGAAAGAA AATTCCACTT GCAATGGGTG GTCGTAGACC TGGAGACGCT GAAATTGTTT ATGCTTCAAC
GAAGAAAGCG GAAAAAGAAC TTAATTGGAA GGCTAAACAC GGGATCGATG ATATGTGTCG GGATCAATGG AACTGGGCTA
GCAAAAACCC TTATGGCTAT GGTAGATCTG GAGATTCCCC CAAGTGATGC TTATGATTGT TAGATTAAGT ATAGATGTTT
TCTTTTGGGG TCTTTTTGAA CCCTGTCTCC CAATAGGTCC TAAAGTTCTT ACTTAGCCTT TCTAAGATAG AAAATCCTTT
CTTAATTATG AATTTCAATA ATGTGGTAAA TAAGTAGTGG TTTTGTTTTG CTTTAGTTAT TCTTTTCGGT TTCCCGCTTA
CAGTATGAGC ATTTTCATGA TCTTCAAGAA CGTATTTATA AATCTAAACC ACACATTATA GATTATGACT AACGAGTAAT
ATCATGCC

>Vigan.01G043200.01
ATGCCAATGA TTCTGGTTAC CGGTGGTGCC GGATACATTG GTAGCCACAC CGTCCTCCAG CTTCTCCTCG CCGGTTACAA
CGTATTGGCC GTCGACAACT TCGACAACTC CTCTGCAGTC TCCATATCCA GAGTCAAGGA ACTCGCCGGA AAATTGGCAA
AGAACTTTTC CTTTGTCGAG TTAGACTTGC GGAACAGAGC TGCGCTCGAG AAAGTTTTTA CAAACCAAAA GTTTGATGCT
GTCATACATT TTGCTGGGCT GAAAGCAGTC GGTGAAAGTG TGCAGAAACC ACTACTGTAC TTTGACAACA ACTTGATTGG
GACAATCATT CTATTTCAAG TCATGGTTGC CCATGGATGC AAGAAGCTTG TGTTCTCATC TTCAGCAACT GTATATGGCT
GGCCAAAGGA GGTTCCATGT ACCGAAGAAT TCCCTTTGTC ATCGACAAAC CCATATGGAA GGACCAAGCT TATCATCGAA
GAGATGTGTC GTGATCTCTA CTGTGCGGAT TCAAATTGGA AAATTATACT GTTGAGATAC TTTAATCCAG TTGGTGCACA
TCCTAGTGGT TTTATTGGTG AGGATCCTCG TGGAGTTCCG AACAATCTCA TGCCCTTTGT TCAACAAGTG GCAGTTGGCA
GACTCCCTTC ACTGACAGTT TTTGGAAACG ATTATAAAAC ATGCGACGGC ACTGGAGTTC GCGATTACAT TCATGTTGTT
GACTTAGCAG AAGGGCACAT TGCTGCTTTG CGTAAACTGG ATGATCCTAA AATAGGTTGC GAAGTTTATA ACTTGGGAAC
AGGAAAGGGA ACATCAGTTT TGGAGATGGT AAAGGCTTTT GAACAGGCCT CTGGAAAGAA AATTCCACTT GCAATGGGTG
GTCGTAGACC TGGAGACGCT GAAATTGTTT ATGCTTCAAC GAAGAAAGCG GAAAAAGAAC TTAATTGGAA GGCTAAACAC
GGGATCGATG ATATGTGTCG GGATCAATGG AACTGGGCTA GCAAAAACCC TTATGGCTAT GGTAGATCTG GAGATTCCCC
CAAGTGA

>Vigan.01G043200.01
MPMILVTGGA GYIGSHTVLQ LLLAGYNVLA VDNFDNSSAV SISRVKELAG KLAKNFSFVE LDLRNRAALE KVFTNQKFDA
VIHFAGLKAV GESVQKPLLY FDNNLIGTII LFQVMVAHGC KKLVFSSSAT VYGWPKEVPC TEEFPLSSTN PYGRTKLIIE
EMCRDLYCAD SNWKIILLRY FNPVGAHPSG FIGEDPRGVP NNLMPFVQQV AVGRLPSLTV FGNDYKTCDG TGVRDYIHVV
DLAEGHIAAL RKLDDPKIGC EVYNLGTGKG TSVLEMVKAF EQASGKKIPL AMGGRRPGDA EIVYASTKKA EKELNWKAKH
GIDDMCRDQW NWASKNPYGY GRSGDSPK*