GBrowse Details

Vigan.01G002400.01

Basic Information:
Name: Vigan.01G002400.01
Multiple alignment
Variant Information
Position: Chr01:179229..181503 (+ strand)
Length: 2275
Functional Information:
Description: Similar to purple acid phosphatase 3-like. [XP_004503250.1, Cicer arietinum]
GO: Molecular Function: acid phosphatase activity (GO:0003993)
Molecular Function: hydrolase activity (GO:0016787)
InterPro: Phosphoesterase domain (IPR004843)
Acid phosphatase, type 5 (IPR024927)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.10,0.17,56.45,42.53,44.61,186.61,1.02,90.73
Automatic updates:
Name: NM_001254442 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max purple acid phosphatase 3-like (LOC100817359), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:179229..179532 (+ strand)
Length: 304
Type: five_prime_UTR
Position: Chr01:179533..179706 (+ strand)
Length: 174
Type: CDS
Position: Chr01:179947..180103 (+ strand)
Length: 157
Type: CDS
Position: Chr01:180217..180324 (+ strand)
Length: 108
Type: CDS
Position: Chr01:180390..180517 (+ strand)
Length: 128
Type: CDS
Position: Chr01:180618..180746 (+ strand)
Length: 129
Type: CDS
Position: Chr01:180837..180904 (+ strand)
Length: 68
Type: CDS
Position: Chr01:180988..181207 (+ strand)
Length: 220
Type: CDS
Position: Chr01:181208..181503 (+ strand)
Length: 296
Type: three_prime_UTR

>Vigan.01G002400.01 class=Sequence position=Chr01:179229..181503 (+ strand)
CTAATATGTG GGTCCACTGA GAACCTATTA TTAGTATGCC GGGCCAAAGT GTCATTGGAA CGAATAAGTT ATCTACGCTA
CTTTGACAAA AACGCTTGTT TCAGTGGGAT TTGCTTACGA TATTGTTAAA ACAGCTTTTA TGTAATTTTA CCTGTGCAAC
CAATATACAG TAAGTTCGTA CGCGACATCA TGTTAAGTCA CACAACTCTA CTATTATGTG ATAATATGCT CTTAAGATGC
AAGAATCTTT TTCTTTATTA CATAACAACA AAGTAAGGAG TTGAAGACAC CCACACACAA AAACATGGCT GGTTTGGGTG
TATGGATGAT GGCTTTCATT AGTCTGTGTT CTCTGAATGT ATCTGCTCTT CTCCAACGCC TACAGCACCC TGTCAAAGCG
GATGGATCAC TTAGTCTTGT GGTCATTGGA GACTGGGGAA GGAAAGGAAC GTACAACCAA TCAGAAGTTG CTGCTCAGGT
CTTTGTTACA TGCATTCTTT GTGAATCCTT AACTCTATTC TGTGTTCCAA TCTAGTGCCT TAATTAAGCA CATGATTTTG
TGAATCCTTT TACTTGCTCG TTTGACGCAT GGCTTTGTTC TTTTGCTGCG ATGTATGTGT AATTGGTTAA AGTAATGGTC
ATGGAATGGA TCTCTCTCTC CTAAAGCAAA AGCTGGTGCT TTTTAGACTC TCATCTCTTT GCCTATGTGA TATGTCAGAT
GGGAAGAGTT GCAGAAAAGT TAAATATCGA CTTTGTGATA TCCACCGGAG ACAATTTCTA CGACGATGGT TTGACTGGTG
TAGACGATCC AGCATTTGAA TTTTCCTTCT CAAAAGTTTA CACTGCCAAG AGCCTCCAAA AGCAGTGGTA TAATGGTGAG
TTCAGACACA CCAACTATTG ATGTATAAGC AAAAATTCTT AGCCAGCTAA ACTGTTCCTT TAATCTTCCA TTCTTCTGTC
CATTAAATGT GATGGACACT GATTTCAGTG TTGGGAAACC ACGACTACAG GGGAGACGTG GAAGCACAAC TGAATCCAAT
CCTTCAGAAA ATCGATCCGA GATGGATCTG CAAAAGATCA TTCATAGTTG ATACTGGTAA CGTGGCTTCT CATCTTGGAT
AGCAATCATT AAGTATTCTG CTAATCTCAA AAACTCTACA GAAATTGCTG AGTTCTTCTT TGTCGATACA ACACCTTTTG
TGGACAAGTA TTTTCTTGAG CCGAAGCACC ACAAGTATGA TTGGAGAGGA GTGCTTCCAA GGGAGAGATA TTTATCAAAG
CTCTTAAAGG TAAATCTCTT AATATTTATC ATCACAACGG ATTAAGATAA AAAAGCAAAT CCAATACATT TTTCCCTTTT
TCTTTCTGTG TGTGTGGTTT TGAACATAGG ATCTGGAAAT AGCATTAAAG GGTTCTTCTG CCAACTGGAA GATTGTTGTG
GGGCATCATC CCATAAGAAG CATAGGACAC CATGGTGACA CCCAAGAGCT CATAAGGCAG CTTCTGCCAA TTCTTGAGGT
CATTCAGCCA AAATATATTA CAGAGACAAT CCTATTCCTA TCCTAGACTA GTGAAATGCA ACCTAAACCG ATGAAATTAA
AATTGCAGGC AAATGATGTG GATATGTACA TTAATGGGCA TGACCATTGC TTGGAACACA TAATTAGCAC AAGCAGGTGT
GTGTTAACGA TTTGTTTGCT AACTAAATCA CCTCTAAATC ATGGTAATTA TATGATGGTA TTATTGAGTG TTGTTGCAGT
CAAATCCAAT TCTTAACCAG TGGTGGAGGT TCAAAGGCAT GGAAAGGAGA CATCGATAAA AATAGGAAAG ACGGCACAAA
GTTTTACTAT GATGGACAAG GATTTATGTC TGTGGAGCTC GAACAAACAA ATGCAAAAGT TGTTTATTAT GATATTTTTG
GCAAAGTTCT GCATGTTGTG AATCTGTCGA AGGCGTTAGG TTCTGTCCAT GCCATATAGA AGAGACTAGT TCAGGAAAGC
ACAAATTAAA GATGAAAAGG AAAGATATCT ATCATATGTA ATGAAATGAA TAAGAGTGAC CAATGAAAGA TTACTGTCAT
TAATAATGAA AAAATATCAG ACACGGCATG CCCCAATAGA GGTCTGATAT GTGCCCTAAA TAGCTGAAGG TGACAGTGTA
ATAATGGTTG AATATTCAAA TATCTTTTAT TGCAGGAAGA AATTGTAAGT GATGTTTCTT TTGATTTTGC ATATATGGGC
TCATTACACC AACTACGGGC TCATTACACC AAGTA

>Vigan.01G002400.01
CTAATATGTG GGTCCACTGA GAACCTATTA TTAGTATGCC GGGCCAAAGT GTCATTGGAA CGAATAAGTT ATCTACGCTA
CTTTGACAAA AACGCTTGTT TCAGTGGGAT TTGCTTACGA TATTGTTAAA ACAGCTTTTA TGTAATTTTA CCTGTGCAAC
CAATATACAG TAAGTTCGTA CGCGACATCA TGTTAAGTCA CACAACTCTA CTATTATGTG ATAATATGCT CTTAAGATGC
AAGAATCTTT TTCTTTATTA CATAACAACA AAGTAAGGAG TTGAAGACAC CCACACACAA AAACATGGCT GGTTTGGGTG
TATGGATGAT GGCTTTCATT AGTCTGTGTT CTCTGAATGT ATCTGCTCTT CTCCAACGCC TACAGCACCC TGTCAAAGCG
GATGGATCAC TTAGTCTTGT GGTCATTGGA GACTGGGGAA GGAAAGGAAC GTACAACCAA TCAGAAGTTG CTGCTCAGAT
GGGAAGAGTT GCAGAAAAGT TAAATATCGA CTTTGTGATA TCCACCGGAG ACAATTTCTA CGACGATGGT TTGACTGGTG
TAGACGATCC AGCATTTGAA TTTTCCTTCT CAAAAGTTTA CACTGCCAAG AGCCTCCAAA AGCAGTGGTA TAATGTGTTG
GGAAACCACG ACTACAGGGG AGACGTGGAA GCACAACTGA ATCCAATCCT TCAGAAAATC GATCCGAGAT GGATCTGCAA
AAGATCATTC ATAGTTGATA CTGAAATTGC TGAGTTCTTC TTTGTCGATA CAACACCTTT TGTGGACAAG TATTTTCTTG
AGCCGAAGCA CCACAAGTAT GATTGGAGAG GAGTGCTTCC AAGGGAGAGA TATTTATCAA AGCTCTTAAA GGATCTGGAA
ATAGCATTAA AGGGTTCTTC TGCCAACTGG AAGATTGTTG TGGGGCATCA TCCCATAAGA AGCATAGGAC ACCATGGTGA
CACCCAAGAG CTCATAAGGC AGCTTCTGCC AATTCTTGAG GCAAATGATG TGGATATGTA CATTAATGGG CATGACCATT
GCTTGGAACA CATAATTAGC ACAAGCAGTC AAATCCAATT CTTAACCAGT GGTGGAGGTT CAAAGGCATG GAAAGGAGAC
ATCGATAAAA ATAGGAAAGA CGGCACAAAG TTTTACTATG ATGGACAAGG ATTTATGTCT GTGGAGCTCG AACAAACAAA
TGCAAAAGTT GTTTATTATG ATATTTTTGG CAAAGTTCTG CATGTTGTGA ATCTGTCGAA GGCGTTAGGT TCTGTCCATG
CCATATAGAA GAGACTAGTT CAGGAAAGCA CAAATTAAAG ATGAAAAGGA AAGATATCTA TCATATGTAA TGAAATGAAT
AAGAGTGACC AATGAAAGAT TACTGTCATT AATAATGAAA AAATATCAGA CACGGCATGC CCCAATAGAG GTCTGATATG
TGCCCTAAAT AGCTGAAGGT GACAGTGTAA TAATGGTTGA ATATTCAAAT ATCTTTTATT GCAGGAAGAA ATTGTAAGTG
ATGTTTCTTT TGATTTTGCA TATATGGGCT CATTACACCA ACTACGGGCT CATTACACCA AGTA

>Vigan.01G002400.01
ATGGCTGGTT TGGGTGTATG GATGATGGCT TTCATTAGTC TGTGTTCTCT GAATGTATCT GCTCTTCTCC AACGCCTACA
GCACCCTGTC AAAGCGGATG GATCACTTAG TCTTGTGGTC ATTGGAGACT GGGGAAGGAA AGGAACGTAC AACCAATCAG
AAGTTGCTGC TCAGATGGGA AGAGTTGCAG AAAAGTTAAA TATCGACTTT GTGATATCCA CCGGAGACAA TTTCTACGAC
GATGGTTTGA CTGGTGTAGA CGATCCAGCA TTTGAATTTT CCTTCTCAAA AGTTTACACT GCCAAGAGCC TCCAAAAGCA
GTGGTATAAT GTGTTGGGAA ACCACGACTA CAGGGGAGAC GTGGAAGCAC AACTGAATCC AATCCTTCAG AAAATCGATC
CGAGATGGAT CTGCAAAAGA TCATTCATAG TTGATACTGA AATTGCTGAG TTCTTCTTTG TCGATACAAC ACCTTTTGTG
GACAAGTATT TTCTTGAGCC GAAGCACCAC AAGTATGATT GGAGAGGAGT GCTTCCAAGG GAGAGATATT TATCAAAGCT
CTTAAAGGAT CTGGAAATAG CATTAAAGGG TTCTTCTGCC AACTGGAAGA TTGTTGTGGG GCATCATCCC ATAAGAAGCA
TAGGACACCA TGGTGACACC CAAGAGCTCA TAAGGCAGCT TCTGCCAATT CTTGAGGCAA ATGATGTGGA TATGTACATT
AATGGGCATG ACCATTGCTT GGAACACATA ATTAGCACAA GCAGTCAAAT CCAATTCTTA ACCAGTGGTG GAGGTTCAAA
GGCATGGAAA GGAGACATCG ATAAAAATAG GAAAGACGGC ACAAAGTTTT ACTATGATGG ACAAGGATTT ATGTCTGTGG
AGCTCGAACA AACAAATGCA AAAGTTGTTT ATTATGATAT TTTTGGCAAA GTTCTGCATG TTGTGAATCT GTCGAAGGCG
TTAGGTTCTG TCCATGCCAT ATAG

>Vigan.01G002400.01
MAGLGVWMMA FISLCSLNVS ALLQRLQHPV KADGSLSLVV IGDWGRKGTY NQSEVAAQMG RVAEKLNIDF VISTGDNFYD
DGLTGVDDPA FEFSFSKVYT AKSLQKQWYN VLGNHDYRGD VEAQLNPILQ KIDPRWICKR SFIVDTEIAE FFFVDTTPFV
DKYFLEPKHH KYDWRGVLPR ERYLSKLLKD LEIALKGSSA NWKIVVGHHP IRSIGHHGDT QELIRQLLPI LEANDVDMYI
NGHDHCLEHI ISTSSQIQFL TSGGGSKAWK GDIDKNRKDG TKFYYDGQGF MSVELEQTNA KVVYYDIFGK VLHVVNLSKA
LGSVHAI*